Genome assembly edited by Rhys A. Farrer

Format:

Book

Contributor:

Farrer, Rhys A., editor.

Series:

Methods in molecular biology (Clifton, N.J.) 1940-6029

Methods in molecular biology 1940-6029

Language:

English

Subjects (All):

Genomes--Laboratory manuals.

Genomes.

Genomics--Laboratory manuals.

Genomics.

Physical Description:

1 online resource

Place of Publication:

Springer US 2025

New York, NY Humana Press 2025

Summary:

This detailed volume examines a wide range of disciplines involving genome assembly and its uses. Covering a diversity of taxa including bacteria, archaea, viruses, animals, plants, and fungi, the book demonstrates the similarities and differences in genome assembly methods and biological differences across those groups, while also describing the latest advances in modern sequencing strategies as well as techniques in the rapidly growing fields of meta-genomics and pan-genomics. Written for the highly successful Methods in Molecular Biology series, chapters include the kind of detail to ensure successful results in new research. Authoritative and practical, Genome Assembly serves as an ideal guide for researchers pursuing genome analysis, a highly active area of global biosciences research

Contents:

DNA Sequencing and the Third-Generation Sequencing Revolution

Methods for Chromosome-Scale Haplotype Reconstruction

Genome Assembly by a Non-Bioinformatician: Case Study of a Small Predatory Natural Enemy Insect, Nesidiocoris tenuis

Current Progress in Phased Genome Assembly from Long-Read DNA Sequencing Data

Laboratory and In-Field Metagenomics for Environmental Monitoring

Algorithms for Short-Read Viral Haplotype Reconstruction: Challenges, Solutions, and Perspectives

Applying the Classic Test dN/dS to Detect Selection in Archaea

Pre-Assembly Read Processing and Quality Control in Fungal Genomes, Exemplified by the Chytrid Batrachochytrium salamandrivorans

Genome Assembly, Polishing, and Analysis of the Chytrid Batrachochytrium salamandrivorans

Fusarium Genome Sequencing and Assembly

Current Approaches in Genome Assembly of Human Fungal Pathogens

A Draft Genome Assembly for the Neglected Tropical Fungal Disease Pathogen Emarellia grisea and Comparison to Other Pleosporalean Agents Causing Eumycetoma in Humans

Seaside to Bedside: Assembly in Research for Emerging Human Fungal Pathogen Candida auris

High-Quality Plant Genomes for and through Pangenomics

The Cancer Genome in the Long Reads Era

Notes:

Includes index

Online resource; title from PDF title page (SpringerLink, viewed August 12, 2025)

ISBN:

9781071647028

1071647024

OCLC:

1531577048

Access Restriction:

Restricted for use by site license