Bioinformatics Research and Applications : Third International Symposium,ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings / edited by Ion Mandoiu, Alexander Zelikovsky.

Format:

Book

Contributor:

Măndoiu, Ion, editor.

Zelikovsky, Alexander, editor.

SpringerLink (Online service)

Series:

Computer Science (Springer-11645)

Lecture notes in computer science. Lecture notes in bioinformatics ; 4463.

Lecture Notes in Bioinformatics ; 4463

Language:

English

Subjects (All):

Life sciences.

Bioinformatics.

Computers.

Pattern perception.

Data mining.

Life Sciences, general.

Computational Biology/Bioinformatics.

Computation by Abstract Devices.

Pattern Recognition.

Data Mining and Knowledge Discovery.

Local Subjects:

Life Sciences, general.

Computational Biology/Bioinformatics.

Computation by Abstract Devices.

Pattern Recognition.

Data Mining and Knowledge Discovery.

Physical Description:

1 online resource (XV, 656 pages).

Edition:

First edition 2007.

Contained In:

Springer eBooks

Place of Publication:

Berlin, Heidelberg : Springer Berlin Heidelberg : Imprint: Springer, 2007.

System Details:

text file PDF

Contents:

GFBA: A Biclustering Algorithm for Discovering Value-Coherent Biclusters

Significance Analysis of Time-Course Gene Expression Profiles

Data-Driven Smoothness Enhanced Variance Ratio Test to Unearth Responsive Genes in 0-Time Normalized Time-Course Microarray Data

Efficiently Finding the Most Parsimonious Phylogenetic Tree Via Linear Programming

A Multi-Stack Based Phylogenetic Tree Building Method

A New Linear-Time Heuristic Algorithm for Computing the Parsimony Score of Phylogenetic Networks: Theoretical Bounds and Empirical Performance

A Bootstrap Correspondence Analysis for Factorial Microarray Experiments with Replications

Clustering Algorithms Optimizer: A Framework for Large Datasets

Ranking Function Based on Higher Order Statistics (RF-HOS) for Two-Sample Microarray Experiments

Searching for Recombinant Donors in a Phylogenetic Network of Serial Samples

Algorithm for Haplotype Inferring Via Galled-Tree Networks with Simple Galls

Estimating Bacterial Diversity from Environmental DNA: A Maximum Likelihood Approach

Invited Talk: Modern Homology Search

Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data

Discovering Relations Among GO-Annotated Clusters by Graph Kernel Methods

An Empirical Comparison of Dimensionality Reduction Methods for Classifying Gene and Protein Expression Datasets

NEURONgrid: A Toolkit for Generating Parameter-Space Maps Using NEURON in a Grid Environment

An Adaptive Resolution Tree Visualization of Large Influenza Virus Sequence Datasets

Wavelet Image Interpolation (WII): A Wavelet-Based Approach to Enhancement of Digital Mammography Images

High Level Programming Environment System for Protein Structure Data

Finding Minimal Sets of Informative Genes in Microarray Data

Noise-Based Feature Perturbation as a Selection Method for Microarray Data

Efficient Generation of Biologically Relevant Enriched Gene Sets

Space and Time Efficient Algorithms to Discover Endogenous RNAi Patterns in Complete Genome Data

A Fast Approximate Covariance-Model-Based Database Search Method for Non-coding RNA

Extensions of Naive Bayes and Their Applications to Bioinformatics

The Solution Space of Sorting by Reversals

A Fast and Exact Algorithm for the Perfect Reversal Median Problem

Genomic Signatures from DNA Word Graphs

Enhancing Motif Refinement by Incorporating Comparative Genomics Data

Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions

Enhanced Prediction of Cleavage in Bovine Precursor Sequences

Invited Talk: A Computational Study of Bidirectional Promoters in the Human Genome

The Identification of Antisense Gene Pairs Through Available Software

Inferring Weak Adaptations and Selection Biases in Proteins from Composition and Substitution Matrices

Markov Model Variants for Appraisal of Coding Potential in Plant DNA

Predicting Palmitoylation Sites Using a Regularised Bio-basis Function Neural Network

A Novel Kernel-Based Approach for Predicting Binding Peptides for HLA Class II Molecules

A Database for Prediction of Unique Peptide Motifs as Linear Epitopes

A Novel Greedy Algorithm for the Minimum Common String Partition Problem

An Efficient Algorithm for Finding Gene-Specific Probes for DNA Microarrays

Multiple Sequence Local Alignment Using Monte Carlo EM Algorithm

Cancer Class Discovery Using Non-negative Matrix Factorization Based on Alternating Non-negativity-Constrained Least Squares

A Support Vector Machine Ensemble for Cancer Classification Using Gene Expression Data

Combining SVM Classifiers Using Genetic Fuzzy Systems Based on AUC for Gene Expression Data Analysis

A BP-SCFG Based Approach for RNA Secondary Structure Prediction with Consecutive Bases Dependency and Their Relative Positions Information

Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice

Statistical Estimate for the Size of the Protein Structural Vocabulary

Coclustering Based Parcellation of Human Brain Cortex Using Diffusion Tensor MRI

An Algorithm for Hierarchical Classification of Genes of Prokaryotic Genomes

Using Multi Level Nearest Neighbor Classifiers for G-Protein Coupled Receptor Sub-families Prediction

Invited Talk: Ab Initio Gene Finding Engines: What Is Under the Hood

Reconstruction of 3D Structures from Protein Contact Maps

A Feature Selection Algorithm Based on Graph Theory and Random Forests for Protein Secondary Structure Prediction

DNA Sites Buried in Nucleosome Become Accessible at Room Temperature: A Discrete-Event-Simulation Based Modeling Approach

Comparative Analysis of Gene-Coexpression Networks Across Species

Comparative Pathway Prediction Via Unified Graph Modeling of Genomic Structure Information

Extending the Calculus of Looping Sequences to Model Protein Interaction at the Domain Level.

Other Format:

Printed edition:

ISBN:

978-3-540-72031-7

9783540720317

Access Restriction:

Restricted for use by site license.