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Plant Epigenetics : Methods and Protocols / edited by Igor Kovalchuk, Franz J. Zemp.

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Holman Biotech Commons QH506 .M45 v.1 (1984)-v.20 (1993),v.22 (1994),v.24 (1994)-v.53 (1996), v.42 (1995) and v.51 (1995) reported missing 3-13-2000 v.55 (1995),v.58 (1996)-v.63 (1997), v.65 (1996)-v.154 (2001), v.156 (2001)-190 (2002), v.192 (2002)-v.407 (2007) v.409 (2007)-v.416 (2008),v.418 (2008)-v.466 v.468-v.490,v.492,v.494,v.496-499 501-506,508,510-512,514,516-517,519-536 538,540-569,571 573-589,591-608,610-615,617,620-627,630-633,636,638,642
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Format:
Book
Contributor:
Kovalchuk, Igor, editor.
Zemp, Franz J., editor.
SpringerLink (Online service)
Series:
Methods in Molecular Biology™, Methods and Protocols, 1064-3745 ; 631.
Springer Protocols (Springer-12345)
Methods in Molecular Biology™, Methods and Protocols, 1064-3745 ; 631
Language:
English
Subjects (All):
Life sciences.
Gene expression.
Biochemistry.
Botany.
Plant genetics.
Life Sciences.
Plant Genetics & Genomics.
Biochemistry, general.
Plant Sciences.
Gene Expression.
Local Subjects:
Life Sciences.
Plant Genetics & Genomics.
Biochemistry, general.
Plant Sciences.
Gene Expression.
Physical Description:
1 online resource (X, 273 pages) : 51 illustrations, 12 illustrations in color.
Contained In:
Springer eBooks
Place of Publication:
Totowa, NJ : Humana Press, 2010.
System Details:
text file PDF
Summary:
The past fifteen years have witnessed major advances in epigenetics, one of the most popular and quickly evolving fields of modern science. In Plant Epigenetics: Methods and Protocols, expert researchers explore the most recent developments, examining in great detail the contribution of epigenetic regulation to cell function in plants. Chapters include a variety of protocols for studying the function of small non-coding RNAs, DNA methylation, and histone modifications in plants, often in different degrees of complexity. This volume describes bioinformatic approaches to the analysis of high-throughput data, such as bisulfite sequencing and Chip-on-chip assays. It features much-desired protocols for plant transgenesis and the analysis of genome stability, with a detailed discussion of their applications to epigenetic studies. Composed in the highly successful Methods in Molecular Biology™ series format, each chapter contains a brief introduction, step-by-step methods, a list of necessary materials, and a Notes section which shares tips on troubleshooting and avoiding known pitfalls. Wide-ranging and innovative, Plant Epigenetics: Methods and Protocols is an invaluable manual designed to help researchers uncover the undiscovered and unexplained phenomena in plant biology.
Contents:
Analysis of DNA Methylation in Plants by Bisulfite Sequencing
Analysis of Bisulfite Sequencing Data from Plant DNA Using CyMATE
Analysis of Locus-Specific Changes in Methylation Patterns Using a COBRA (Combined Bisulfite Restriction Analysis) Assay
Detection of Changes in Global Genome Methylation Using the Cytosine-Extension Assay
In Situ Analysis of DNA Methylation in Plants
Analysis of Mutation/Rearrangement Frequencies and Methylation Patterns at a Given DNA Locus Using Restriction Fragment Length Polymorphism
Isoschizomers and Amplified Fragment Length Polymorphism for the Detection of Specific Cytosine Methylation Changes
Analysis of Small RNA Populations Using Hybridization to DNA Tiling Arrays
Northern Blotting Techniques for Small RNAs
qRT-PCR of Small RNAs
Cloning New Small RNA Sequences
Genome-Wide Mapping of Protein-DNA Interaction by Chromatin Immunoprecipitation and DNA Microarray Hybridization (ChIP-chip). Part A: ChIP-chip Molecular Methods
Genome-Wide Mapping of Protein-DNA Interaction by Chromatin Immunoprecipitation and DNA Microarray Hybridization (ChIP-chip). Part B: ChIP-chip Data Analysis
Metaanalysis of ChIP-chip Data
Chromatin Immunoprecipitation Protocol for Histone Modifications and Protein-DNA Binding Analyses in Arabidopsis
cDNA Libraries for Virus-Induced Gene Silencing
Detection and Quantification of DNA Strand Breaks Using the ROPS (Random Oligonucleotide Primed Synthesis) Assay
Reporter Gene-Based Recombination Lines for Studies of Genome Stability
Plant Transgenesis.
Other Format:
Printed edition:
ISBN:
9781607616467
Access Restriction:
Restricted for use by site license.

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