Methods of microarray data analysis II : papers from CAMDA '01 / edited by Simon M. Lin and Kimberly F. Johnson.

Format:

Book

Conference/Event

Contributor:

Lin, Simon M., 1957-

Johnson, Kimberly F., 1972-

Alumni and Friends Memorial Book Fund.

Conference Name:

CAMDA (Conference) (2nd : 2001 : Duke University)

Language:

English

Subjects (All):

DNA microarrays--Data processing--Congresses.

DNA microarrays.

Oligonucleotide Array Sequence Analysis.

DNA microarrays--Data processing.

Medical Subjects:

Oligonucleotide Array Sequence Analysis.

Genre:

Conference papers and proceedings.

Physical Description:

viii, 214 pages : illustrations ; 25 cm

Place of Publication:

Boston : Klumer Academic Publishers, [2002]

Contents:

An Introduction to DNA Microarrays / Patrick McConnell, Kimberly Johnson, David J. Lockhart 9

Experimental Design for Gene Microarray Experiments and Differential Expression Analysis / G.V. Bobashev, S. Das, A. Das 23

Microarray Data Processing and Analysis / Joaquin Dopazo 43

Biology-Driven Clustering of Microarray Data / Kevin R. Coombes, Keith A. Baggerly, David N. Stivers, Jing Wang, David Gold, Hsi-Guang Sung, Sang-Joon Lee 65

Extracting Global Structure from Gene Expression Profiles / Charless Fowlkes, Qun Shan, Serge Belongie, Jitendra Malik 81

Supervised Neural Networks for Clustering Conditions in DNA Array Data After Reducing Noise by Clustering Gene Expression Profiles / Alvaro Mateos, Javier Herrero, Javier Tamames, Joaquin Dopazo 91

Bayesian Decomposition Analysis of Gene Expression in Yeast Deletion Mutants / Ghislain Bidaut, Thomas D. Moloshok, Jeffrey D. Grant, Frank J. Manion, Michael F. Ochs 105

Using Functional Genomic Units to Corroborate User Experiments with the Rosetta Compendium / Simon M. Lin, Xuejun Liao, Patrick McConnell, Korkut Vata, Lawrence Carin, Pascal Goldschmidt 123

Fishing Expedition - A Supervised Approach to Extract Patterns from a Compendium of Expression Profiles / Zhen Zhang, Grier Page, Hong Zhang 139

Modeling Pharmacogenomics of the NCI-60 Anticancer Data Set: Utilizing Kernel PLS to Correlate the Microarray Data to Therapeutic Responses / Nilanjan Dasgupta, Simon M. Lin, Lawrence Carin 151

Analysis of Gene Expression Profiles and Drug Activity Patterns by Clustering and Bayesian Network Learning / Jeong-Ho Chang, Kyu-Baek Hwang, Byoung-Tak Zhang 169

Evaluation of Current Methods of Testing Differential Gene Expression and Beyond / Yi-Ju Li, Ling Zhang, Marcy C. Speer, Eden R. Martin 185

Extracting Knowledge from Genomic Experiments by Incorporating the Biomedical Literature / James P. Sluka 195.

Notes:

Contains papers from the second CAMDA (Critical Assessment of Microarray Data Analysis) conference held in October 2001.

Includes bibliographical references and index.

Local Notes:

Acquired for the Penn Libraries with assistance from the Alumni and Friends Memorial Book Fund.

ISBN:

1402071116

OCLC:

50271328